Issues

• Add motif searches

  uio-bmi/compairr#53 · Filter by author torognes opened on Jun 24, 2026

• Can compairr be used as a library, i.e. linked into another C++ program?

  uio-bmi/compairr#51 · Filter by author schristley opened on Apr 23, 2025

• Allow >2 files as input (concatenate as 1 file)

  enhancement
  uio-bmi/compairr#50 · Filter by author LonnekeScheffer opened on Mar 4, 2025

• Read junctions and trim off leading and trailing residues

  enhancement
  uio-bmi/compairr#49 · Filter by author torognes opened on Feb 28, 2025
  1

  

• Add matched_fraction scoring function

  enhancement
  uio-bmi/compairr#48 · Filter by author torognes opened on Feb 28, 2025
  

• Add reverse ratio scoring function, update docs

  enhancement
  uio-bmi/compairr#47 · Filter by author torognes opened on Feb 28, 2025
  

• Retain first sequence id when deduplicating

  enhancement
  uio-bmi/compairr#46 · Filter by author torognes opened on Feb 28, 2025
  

• Allow the duplicate_count column to be missing

  enhancement
  uio-bmi/compairr#45 · Filter by author torognes opened on Feb 28, 2025
  3

  

• Allow multiple indels or more substitutions with a single indel

  enhancement
  uio-bmi/compairr#42 · Filter by author torognes opened on Apr 28, 2023
  1

  

• Allow partial V or J gene match

  enhancement
  uio-bmi/compairr#9 · Filter by author torognes opened on Apr 14, 2021
  2

  

• Distance 2 with indels

  enhancement
  uio-bmi/compairr#2 · Filter by author torognes opened on Apr 9, 2021
  1