Issues

• error with coverage table

  BinPro/CONCOCT#340 · Filter by author KonstantinaRi opened on Jun 23, 2025

• Problem with concoct_coverage_table.py : TypeError: write() argument must be str, not bytes

  BinPro/CONCOCT#339 · Filter by author FahimTheWanderer opened on May 16, 2025
  3

• Feature names are only supported if all input features have string names, but your input has ['int', 'str'] as feature name / column name types

  BinPro/CONCOCT#338 · Filter by author Anindyadey98 opened on Apr 16, 2025
  1

• how to write the number of threads to use with cut_up_fasta.py

  BinPro/CONCOCT#337 · Filter by author ShevchenkoAlla opened on Jan 26, 2025
  2

• command not found for inital concoct steps

  BinPro/CONCOCT#336 · Filter by author lyisrae1 opened on Oct 23, 2024

• Concoct won't read indexed bam file

  BinPro/CONCOCT#335 · Filter by author emily-ap opened on Aug 16, 2024

• TypeError: write() argument must be str, not bytes

  BinPro/CONCOCT#334 · Filter by author ramnageena11 opened on May 24, 2024
  2

• logmodel.fit(X_train, y_train) not working

  BinPro/CONCOCT#333 · Filter by author fb87fb opened on May 13, 2024

• Error in data type (feature table)

  BinPro/CONCOCT#332 · Filter by author ramnageena11 opened on Feb 21, 2024

• extract_fasta_bins.py problem

  BinPro/CONCOCT#331 · Filter by author jiangshf5 opened on Feb 6, 2024

• Why is concoct using all available threads instead of the mentioned number?

  BinPro/CONCOCT#330 · Filter by author anw-sh opened on Oct 5, 2023
  1

• Concoct endless warning due to OpenBLAS

  BinPro/CONCOCT#329 · Filter by author HouyuZhang opened on Aug 25, 2023
  3

• CONCOCT 0.4.1

  BinPro/CONCOCT#328 · Filter by author Guowei-nju opened on Aug 24, 2023

• conda CONCOCT v1.1.0 recipe update for osx?

  BinPro/CONCOCT#327 · Filter by author franciscozorrilla opened on Jul 21, 2023

• import vbgmm

  BinPro/CONCOCT#326 · Filter by author Vicbuz opened on May 25, 2023
  2

• How to run concoct

  BinPro/CONCOCT#325 · Filter by author minghong opened on Mar 17, 2023
  1

• concoct_refine fails under python3

  BinPro/CONCOCT#324 · Filter by author StickHu opened on Mar 12, 2023

• TypeError: Feature names

  BinPro/CONCOCT#323 · Filter by author jpinus opened on Feb 9, 2023
  2

• Feature names are only supported if all input features have string names

  BinPro/CONCOCT#322 · Filter by author Rahimlou opened on Dec 25, 2022
  9

• Error with scikit-learn 1.2 : TypeError: Feature names

  BinPro/CONCOCT#321 · Filter by author nickp60 opened on Dec 10, 2022
  9

• Concoct Error Could not retrieve index file

  BinPro/CONCOCT#319 · Filter by author howla1ke opened on Nov 10, 2022
  2

• Description of outputs

  BinPro/CONCOCT#318 · Filter by author vinisalazar opened on Nov 2, 2022

• putative bug in cluster table

  BinPro/CONCOCT#317 · Filter by author Axolotl233 opened on Sep 8, 2022

• endless OpenBLAS Warning again

  BinPro/CONCOCT#316 · Filter by author Xiaoyu2425 opened on Sep 5, 2022
  1

• .csv files not getting generated

  BinPro/CONCOCT#315 · Filter by author saras224 opened on Aug 28, 2022