Migrate to OWL API 5 and set version to 3.0.0

.github/workflows/scala.yml

@@ -10,14 +10,19 @@ jobs:
   build:
 
     runs-on: ubuntu-latest
-
+    strategy:
+      matrix:
+        # OWL API 5.5 requires Java 11
+        java: [ 11, 21 ]
+    name: Java ${{ matrix.java }}
     steps:
-    - uses: actions/checkout@v2
-    - name: Set up JDK 11
-      uses: actions/setup-java@v2
+    - uses: actions/checkout@v4
+    - name: Set up JDK
+      uses: actions/setup-java@v4
       with:
-        java-version: '11'
-        distribution: 'adopt'
+        java-version: ${{ matrix.java }}
+        distribution: 'temurin'
+        cache: 'sbt'
     - name: Setup SBT
       uses: sbt/setup-sbt@v1
     - name: Run tests

build.sbt

@@ -4,7 +4,7 @@ lazy val gitCommitString = SettingKey[String]("gitCommit")
 
 lazy val commonSettings = Seq(
   organization := "org.geneontology",
-  version := "2.3.4",
+  version := "3.0.0",
   licenses := Seq("MIT license" -> url("https://opensource.org/licenses/MIT")),
   homepage := Some(url("https://github.com/balhoff/relation-graph")),
   scalaVersion := "2.13.17",
@@ -15,10 +15,12 @@ lazy val commonSettings = Seq(
 lazy val publishSettings = Seq(
   Test / publishArtifact := false,
   publishMavenStyle := true,
+  // sbt-git's GitVersioning (enabled for cli) otherwise derives isSnapshot from git state for the whole build
+  isSnapshot := version.value.endsWith("-SNAPSHOT"),
   publishTo := {
-    val nexus = "https://oss.sonatype.org/"
-    if (isSnapshot.value) Some("snapshots" at nexus + "content/repositories/snapshots")
-    else Some("releases" at nexus + "service/local/staging/deploy/maven2")
+    val centralSnapshots = "https://central.sonatype.com/repository/maven-snapshots/"
+    if (isSnapshot.value) Some("central-snapshots" at centralSnapshots)
+    else localStaging.value
   },
   pomExtra :=
     <developers>
@@ -46,12 +48,12 @@ lazy val core = project
     libraryDependencies ++= Seq(
       "dev.zio" %% "zio" % zioVersion,
       "dev.zio" %% "zio-streams" % zioVersion,
-      "org.geneontology" %% "whelk-owlapi" % "1.2.1",
+      "org.geneontology" %% "whelk-owlapi" % "2.0.0",
       "org.apache.jena" % "apache-jena-libs" % "4.10.0" exclude("org.slf4j", "slf4j-log4j12"),
       "com.typesafe.scala-logging" %% "scala-logging" % "3.9.6",
       "dev.zio" %% "zio-test" % zioVersion % Test,
       "dev.zio" %% "zio-test-sbt" % zioVersion % Test,
-      "com.outr" %% "scribe-slf4j" % scribeVersion % Test
+      "com.outr" %% "scribe-slf4j2" % scribeVersion % Test
     )
   )
   .settings(publishSettings)
@@ -68,7 +70,7 @@ lazy val cli = project
     executableScriptName := "relation-graph",
     publish / skip := true,
     libraryDependencies ++= Seq(
-      "com.outr" %% "scribe-slf4j" % scribeVersion,
+      "com.outr" %% "scribe-slf4j2" % scribeVersion,
       "com.github.alexarchambault" %% "case-app" % "2.1.0",
       "io.circe" %% "circe-yaml" % "0.14.2",
     ),

project/build.properties

@@ -1 +1 @@
-sbt.version=1.11.7
+sbt.version=1.13.0

project/plugins.sbt

@@ -1,4 +1,4 @@
 addSbtPlugin("com.github.sbt" % "sbt-native-packager" % "1.11.4")
 addSbtPlugin("com.eed3si9n" % "sbt-buildinfo" % "0.13.1")
 addSbtPlugin("com.github.sbt" % "sbt-git" % "2.1.0")
-addSbtPlugin("com.github.sbt" % "sbt-pgp" % "2.3.1")
+addSbtPlugin("com.github.sbt" % "sbt-pgp" % "2.3.2")