Issues

• New paper

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#49 · Filter by author mikessh opened on Oct 31, 2018

• More data - 3

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#48 · Filter by author mikessh opened on Jul 26, 2018

• More data - 2

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#47 · Filter by author mikessh opened on Apr 27, 2018

• Recent data TCR-neoantigen (4 structures)

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#46 · Filter by author mikessh opened on Mar 13, 2018

• More data

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#45 · Filter by author mikessh opened on Sep 26, 2017
  2

• Maybe missed paper

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#44 · Filter by author mikessh opened on Jun 20, 2017

• Complexes that we fail to extract CDR1-3s

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#43 · Filter by author mikessh opened on Apr 13, 2017
  1

  

• Add meaningful names for MHC allele annotation

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#42 · Filter by author mikessh opened on Apr 13, 2017
  1

  

• Complex annotation patching

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#40 · Filter by author mikessh opened on Apr 13, 2017
  

• Known complexes with covalently linked peptide/ peptide not in separate chain

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#39 · Filter by author mikessh opened on Apr 13, 2017

• Comments + text about imputation

  naive model
  antigenomics/tcr-pmhc-study#21 · Filter by author vadimnazarov opened on Mar 29, 2017
  

• Smooth contact heatmap in simple model

  naive model
  antigenomics/tcr-pmhc-study#18 · Filter by author mikessh opened on Mar 24, 2017
  

• TODO

  antigenomics/tcr-pmhc-study#9 · Filter by author mikessh opened on Mar 16, 2017

• Problems in "final.annotations.txt"

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#8 · Filter by author glennerad opened on Feb 12, 2017
  4

• errors in final.annotations.txt

  data collection/preprocessing
  antigenomics/tcr-pmhc-study#7 · Filter by author glennerad opened on Jan 26, 2017

• Something strange in the Rmd file when FRs are the input file

  bug
  antigenomics/tcr-pmhc-study#6 · Filter by author vadimnazarov opened on Dec 23, 2016
  1

• Unnecessary column tcr_j_allele in the final.annotations.txt

  bug
  antigenomics/tcr-pmhc-study#4 · Filter by author vadimnazarov opened on Dec 22, 2016
  

• Get affinity data

  antigenomics/tcr-pmhc-study#3 · Filter by author mikessh opened on Dec 14, 2016
  4

• Better annotation

  antigenomics/tcr-pmhc-study#2 · Filter by author mikessh opened on Dec 14, 2016
  

• Update structure analysis

  antigenomics/tcr-pmhc-study#1 · Filter by author mikessh opened on Dec 14, 2016