nf-bactopia CI

build.yml

42 workflow runs

Merge pull request #1 from rwilliams/fix/samples-cloud-storage-path
completed successfully:
nf-bactopia CI#55:Commitb8acb28pushedbyrpetit3
main
Oct 9, 202659s
use Nextflow.file() instead of new File() for samples/accessions to support cloud storage paths
failed:
nf-bactopia CI#54:Pull request#1openedbyrwilliams
rwilliams:fix/samples-cloud-storage-path
Sep 4, 202630d 0h 2m 22s
transition to provider agnostic context docs
completed successfully:
nf-bactopia CI#53:Commitf8b1887pushedbyrpetit3
main
Aug 4, 20261m 10s
fix typo
completed successfully:
nf-bactopia CI#52:Commit4a6ba1apushedbyrpetit3
main
Aug 4, 20266m 16s
add to motd
failed:
nf-bactopia CI#51:Commitd259fe4pushedbyrpetit3
main
Jul 29, 20261m 21s
motd updates
completed successfully:
nf-bactopia CI#50:Commit6e2f301pushedbyrpetit3
main
May 18, 20261m 10s
fix bactopia-tool missing_required flag being reset to false
completed successfully:
nf-bactopia CI#49:Commitce9beb0pushedbyrpetit3
main
May 12, 202659s
cleanup for scrubber
completed successfully:
nf-bactopia CI#48:Commitfe8657bpushedbyrpetit3
main
May 6, 202659s
create db param validator function, bump version
completed successfully:
nf-bactopia CI#47:Commit000e908pushedbyrpetit3
main
May 6, 20261m 15s
update changelog
completed successfully:
nf-bactopia CI#46:Commit0f523d5pushedbyrpetit3
main
May 5, 20261m 0s
update readme
completed successfully:
nf-bactopia CI#45:Commit4f76f78pushedbyrpetit3
main
May 5, 20261m 14s
add more tests
completed successfully:
nf-bactopia CI#44:Commit626e957pushedbyrpetit3
main
May 5, 202658s
add checks for scrubber workflows
completed successfully:
nf-bactopia CI#43:Commit1445bc5pushedbyrpetit3
main
May 5, 20261m 26s
catch floats being interpreted as strings
completed successfully:
nf-bactopia CI#42:Commit385e695pushedbyrpetit3
main
May 4, 202658s
improve motd test
completed successfully:
nf-bactopia CI#41:Commit86f3966pushedbyrpetit3
main
Apr 29, 20261m 8s
fix url for docs site
completed successfully:
nf-bactopia CI#40:Commite1cc81cpushedbyrpetit3
main
Apr 29, 202658s
bump version, and min nextflow version
completed successfully:
nf-bactopia CI#39:Commitab16697pushedbyrpetit3
main
Apr 29, 20261m 2s
fix tests
completed successfully:
nf-bactopia CI#38:Commit853d2cfpushedbyrpetit3
main
Apr 24, 20261m 1s
v2.0.3 bump
failed:
nf-bactopia CI#37:Commit70dbccbpushedbyrpetit3
main
Apr 24, 20261m 4s
improve schema check, more jokes, because joke'
failed:
nf-bactopia CI#36:Commit97182dfpushedbyrpetit3
main
Apr 24, 202647s
add checks for valid fofn and sccession files
completed successfully:
nf-bactopia CI#35:Commit3a0516epushedbyrpetit3
main
Apr 21, 20261m 0s
fix bug in help_all, bump version
completed successfully:
nf-bactopia CI#34:Commitf4e18cfpushedbyrpetit3
main
Apr 21, 20261m 0s
return Records instead of Maps for meta variables
completed successfully:
nf-bactopia CI#33:Commitaf7782apushedbyrpetit3
main
Apr 11, 202653s
update readme
completed successfully:
nf-bactopia CI#32:Commite3ba508pushedbyrpetit3
main
Apr 9, 20261m 12s
add more gha
completed successfully:
nf-bactopia CI#31:Commit0ebfe59pushedbyrpetit3
main
Apr 9, 202657s

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