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caporaso-lab

README.md

Hi there 👋

This repository contains software, data, and other content produced in the Caporaso Lab.

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  1. plugin-template plugin-template Public

    Template to help you create your new QIIME 2 plugin. 🚀

    Python 1 5

Repositories

Showing 10 of 48 repositories
  • website Public
    caporaso-lab/website's past year of commit activity
    Astro 0 MIT 1 0 0 Updated Aug 4, 2026
  • pathogenome-amr-detection Public
    caporaso-lab/pathogenome-amr-detection's past year of commit activity
    Nextflow 0 1 0 0 Updated Aug 4, 2026
  • q2-qsip2 Public

    A QIIME 2 plugin for the analysis of qSIP data.

    caporaso-lab/q2-qsip2's past year of commit activity
    Python 1 BSD-3-Clause 0 0 0 Updated Jun 10, 2026
  • plugin-template Public

    Template to help you create your new QIIME 2 plugin. 🚀

    caporaso-lab/plugin-template's past year of commit activity
    Python 1 BSD-3-Clause 5 7 0 Updated Jun 10, 2026
  • genome-sampler Public

    genome-sampler: sample viral genomes across time of isolation, location of isolation, and genome divergence.

    caporaso-lab/genome-sampler's past year of commit activity
    Python 7 BSD-3-Clause 9 18 4 Updated May 8, 2026
  • qiime.org Public
    caporaso-lab/qiime.org's past year of commit activity
    HTML 0 0 0 0 Updated May 4, 2026
  • caporaso-lab.github.io Public archive

    Lab website

    caporaso-lab/caporaso-lab.github.io's past year of commit activity
    HTML 1 BSD-3-Clause 20 0 0 Updated Apr 29, 2026
  • amf-tutorial Public

    Test of AMF tutorial

    caporaso-lab/amf-tutorial's past year of commit activity
    Makefile 0 4 0 0 Updated Nov 24, 2025
  • gut-to-soil-manuscript-figures Public
    caporaso-lab/gut-to-soil-manuscript-figures's past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 0 1 Updated Nov 24, 2025
  • q2view-visualizations Public

    Hosting of visualizations for the QIIME 2 View gallery.

    caporaso-lab/q2view-visualizations's past year of commit activity
    0 0 0 0 Updated Oct 30, 2025
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