All workflows

Workflow runs

• Object-model correctness fixes (replaces nine PRs)

  requires action with the application:
  Pre-Merge Checks#209:Pull request#318synchronizebycyrillustan
  BenjaminDEMAILLE:group/so-correctness

  Sep 25, 2026Action required
  More actions for workflow run 209

• On-disk and DelayedArray layers: join, stitch, save, reload (replaces four PRs)

  failed:
  Pre-Merge Checks#208:Pull request#320synchronizebyBenjaminDEMAILLE
  BenjaminDEMAILLE:group/so-ondisk

  Sep 1, 202630d 0h 1m 54s
  More actions for workflow run 208

• On-disk and DelayedArray layers: join, stitch, save, reload (replaces four PRs)

  failed:
  Pre-Merge Checks#207:Pull request#320openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:group/so-ondisk

  Sep 1, 202630d 0h 5m 38s
  More actions for workflow run 207

• Say what went wrong, and which names are at fault (replaces six PRs)

  failed:
  Pre-Merge Checks#206:Pull request#319synchronizebyBenjaminDEMAILLE
  BenjaminDEMAILLE:group/so-messages

  Sep 1, 202630d 0h 6m 2s
  More actions for workflow run 206

• Say what went wrong, and which names are at fault (replaces six PRs)

  failed:
  Pre-Merge Checks#205:Pull request#319openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:group/so-messages

  Sep 1, 202630d 0h 0m 32s
  More actions for workflow run 205

• Object-model correctness fixes (replaces nine PRs)

  failed:
  Pre-Merge Checks#204:Pull request#318openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:group/so-correctness

  Sep 1, 202630d 0h 1m 23s
  More actions for workflow run 204

• Return status columns as vectors, not nested frames

  failed:
  Pre-Merge Checks#203:Pull request#317synchronizebyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/hvf-svf-nested-columns

  Sep 1, 20265h 6m 32s
  More actions for workflow run 203

• Return status columns as vectors, not nested frames

  failed:
  Pre-Merge Checks#202:Pull request#317openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/hvf-svf-nested-columns

  Sep 1, 20265h 10m 46s
  More actions for workflow run 202

• Subset a reduction's model along with the reduction

  failed:
  Pre-Merge Checks#201:Pull request#316openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/subset-umap-model

  Sep 1, 20265h 25m 7s
  More actions for workflow run 201

• Name the variables an expression asks for and the object lacks

  failed:
  Pre-Merge Checks#200:Pull request#315openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/whichcells-missing-variable

  Sep 1, 20265h 43m 56s
  More actions for workflow run 200

• Say which cell names a rename would repeat

  failed:
  Pre-Merge Checks#199:Pull request#314openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/rename-duplicate-names

  Sep 1, 20265h 56m 0s
  More actions for workflow run 199

• Refuse meta data that is not one value per cell

  failed:
  Pre-Merge Checks#198:Pull request#313openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/metadata-length-recycling

  Sep 1, 20266h 1m 46s
  More actions for workflow run 198

• Report a missing key as NA rather than failing

  failed:
  Pre-Merge Checks#197:Pull request#312openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/key-without-key

  Aug 31, 20266h 37m 48s
  More actions for workflow run 197

• Take an unnamed vector of feature meta data in feature order

  failed:
  Pre-Merge Checks#196:Pull request#311openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/assay5-feature-metadata-vector

  Aug 31, 20266h 50m 40s
  More actions for workflow run 196

• Do not copy a layer to fetch it whole

  failed:
  Pre-Merge Checks#195:Pull request#310openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:perf/layerdata-skip-full-subset

  Aug 31, 20268h 43m 14s
  More actions for workflow run 195

• Say that merge(collapse = TRUE) is not implemented

  failed:
  Pre-Merge Checks#194:Pull request#309openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:docs/merge-collapse-unimplemented

  Aug 31, 20268h 56m 15s
  More actions for workflow run 194

• Name a logged command after the function, not its wrapper

  failed:
  Pre-Merge Checks#193:Pull request#308openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/logseuratcommand-wrappers

  Aug 31, 20269h 0m 37s
  More actions for workflow run 193

• Say which features lose their data when replacing a layer

  failed:
  Pre-Merge Checks#192:Pull request#307openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/layerdata-silent-feature-drop

  Aug 31, 20269h 7m 25s
  More actions for workflow run 192

• Treat an object with no assays as empty, not malformed

  failed:
  Pre-Merge Checks#191:Pull request#306openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/empty-assays-validity

  Aug 31, 202610m 5s
  More actions for workflow run 191

• Say which names are duplicated, and what to do

  failed:
  Pre-Merge Checks#190:Pull request#305openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/duplicate-names-message

  Aug 31, 20261d 3h 27m 53s
  More actions for workflow run 190

• Warn when a scalar identity is not a meta data column

  failed:
  Pre-Merge Checks#189:Pull request#304openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/idents-scalar-warning

  Aug 31, 20261d 3h 34m 13s
  More actions for workflow run 189

• Name the cells behind a bad segmentation

  failed:
  Pre-Merge Checks#188:Pull request#303openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/segmentation-messages

  Aug 31, 20261d 3h 39m 35s
  More actions for workflow run 188

• Keep NA identities out of the other groups in CellsByIdentities

  failed:
  Pre-Merge Checks#187:Pull request#302openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/cellsbyidentities-na

  Aug 30, 20261d 6h 26m 58s
  More actions for workflow run 187

• Fix RenameCells on single-cell and v5 assays

  failed:
  Pre-Merge Checks#186:Pull request#301openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/renamecells-single-and-v5

  Aug 30, 20261d 6h 35m 32s
  More actions for workflow run 186

• Fix coercing a v5 assay that has no feature metadata

  failed:
  Pre-Merge Checks#185:Pull request#300openedbyBenjaminDEMAILLE
  BenjaminDEMAILLE:fix/assay-empty-feature-meta

  Aug 30, 20261d 8h 43m 34s
  More actions for workflow run 185