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YuLab-SMU
enrichit
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cran 0.2.7
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#51:
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perf: deterministic ORA gene order and vectorized gene-set filtering
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fix(ora): treat only a RESTRICTED universe as restricting
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#49:
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perf(ora): skip the identity gene-set/universe intersection
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#48:
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remove artifacts of the retired dsea implementations
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update news
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Fix test dependency declaration for jsonlite
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Add jsonlite to test dependencies
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dsea: replace the set test with design-aware GSEA and an in-package s…
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Add the NB-bootstrap engine core (st_nb_boot_cpp) for dsea_nb
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golden test: compare to 1e-10, not bit-exact (fixes CI on all platforms)
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dsea(): fix the examples that broke CI, and carry the 6-field container
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dsea(): limma-free native engine, DseaData container, two modelling f…
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feat: native C++ engine for dsea(), set_test() renamed to dsea()
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feat: add as_elist() and set_test() for design-aware set tests
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fix: coerce non-character universe to character instead of dropping it
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fix/ora-gson-universe-non-character
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feat: add DESeq2 adapters as_ranked() and as_genes()
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fix: clarify permutation GSEA scoreType contract
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fix: condition permutation GSEA p-value denominator on the ES sign (#3)
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Merge pull request #2 from eddelbuettel/fix/eigen_5.0.1
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docs: merge NEWS 0.2.5.9008–0.2.5.9013 into a single highest-dev # se…
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docs: consolidate NEWS sections 0.2.5.9009–0.2.5.9012 into single top…
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bump v0.2.5.9012: shorten show() qvalue hint to a one-line man-page p…
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bump v0.2.5.9012: shorten show() qvalue hint to a one-line man-page p…
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bump v0.2.5.9012: shorten show() qvalue hint to a one-line man-page p…
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